CABBI Research Data

Data Sets

DATA KEYWORDS

 

CABBI Mapper

Theme: Sustainability

Economics
Geospatial
Modeling

BEPAM Model Code and CABBI Simulation Results
for ‘Assessing the Additional Carbon Savings
with Biofuel’

Theme: Sustainability

Economics
Modeling
Software

High-Level β-Carotene Production from Xylose
by Engineered Saccharomyces cerevisiae without Overexpression of a Truncated HMG1 (tHMG1)

Theme: Conversion

Genome Engineering

Arabidopsis Plants Expressing Only the
Redox-Regulated Rca-α Isoform Have
Constrained Photosynthesis and Plant Growth

Theme: Feedstock Production

Biomass Analytics
Phenomics

Metabolic Engineering of β-Oxidation to
Leverage Thioesterases for Production of
2-Heptanone, 2-Nonanone, and 2-Undecanone

Theme: Conversion

Metabolomics

University of Illinois AmeriFlux Measurements

Theme: Sustainability

Field Data

Equivalent Soil Mass Calculation Software

Theme: Sustainability

Software

A Mass Spectrometry-Based High-Throughput Screening Method for Engineering Fatty Acid Synthases with Improved Production of Medium Chain Fatty Acids

Theme: Conversion

Lipidomics
Metabolomics

A Genetic Toolbox for Metabolic Engineering
of Issatchenkia orientalis

Theme: Conversion

Genome Engineering
Genomics
Transcriptomics

BioSTEAM: A Fast and Flexible Platform for
the Design, Simulation, and Techno-Economic
Analysis of Biorefineries under Uncertainty

Themes: Conversion, Sustainability

Economics
Modeling
Software

Photoenzymatic Enantioselective Intermolecular
Radical Hydroalkylation: Experimental Crystal
Structure Determination

Theme: Conversion

Catalysis

Land Productivity and Land Availability
for Growing Bioenergy Crop in the
Contiguous U.S.

Theme: Sustainability

Economics
Modeling

Production of Galactitol from Galactose by
Oleaginous Yeast Rhodosporidium toruloides
IFO0880

Theme: Conversion

Genomics
Metabolomics

Reward-Based Participant Management
for Crowd-Sourcing Rainfall Monitoring:
An Agent-Based Model Simulation

Theme: Sustainability

Modeling
Software

Assessing Precipitation, Evapotranspiration,
and NDVI as Controls of U.S. Great Plains
Plant Production

Theme: Sustainability

Field Data
Modeling

PhenoCam Dataset v2.0 — Vegetation
Phenology from Digital Camera Imagery,
2000-2018

Theme: Sustainability

Field Data

PhenoCam Dataset v2.0 — Digital Camera
Imagery from the PhenoCam Network,
2000-2018

Theme: Sustainability

Field Data

Microbial Carbon Use Efficiency Predicted
from Genome-Scale Metabolic Models

Theme: Sustainability

Metabolomics
Modeling
Phylogenetic Relationship

Bayesian Confidence Intervals for Multiplexed
Proteomics Integrate Ion-Statistics with
Peptide Quantification Concordance

Theme: Conversion

Proteomics
Software

Development of a CRISPR/Cas9-Based Tool
for Gene Deletion in
 Issatchenkia orientalis

Theme: Conversion

Genome Engineering
Genomics
Transcriptomics

Sugar Production from Bioenergy Sorghum
by Using Pilot-Scale Continuous Hydrothermal
Pretreatment Combined with Disk Refining

Themes: Conversion, Sustainability

Genomics
Hydrolysate

Adopting Bioenergy Crops: Does Farmers’
Attitude toward Loss Matter?

Theme: Sustainability

Economics
Modeling
Software

Development of a CRISPR/Cas9 System
for High-Efficiency Multiplexed Gene Deletion
in Rhodosporidium toruloides

Theme: Conversion

Genome Engineering
Genomics
Transcriptomics

Excessive Rainfall Leads to Maize Yield
Loss of a Comparable Magnitude to
Extreme Drought in the United States

Theme: Sustainability

Economics
Field Data

Highly Efficient Single-Pot Scarless
Golden Gate Assembly

Theme: Conversion

Genome Engineering
Genomics

Generation of a Selectable Marker Free, Highly
Expressed Single Copy Locus as Landing Pad
for Transgene Stacking in Sugarcane

Theme: Feedstock Production

Biomass Analytics
Genomics

Miscanthus sinensis Multi-Location Trial:
Phenotypic Analysis, Genome-Wide
Association, and Genomic Prediction

Theme: Feedstock Production

Biomass Analytics
Genomics

Winter Hardiness of Miscanthus (III):
Genome‐Wide Association and Genomic
Prediction for Overwintering Ability in
Miscanthus sinensis

Theme: Feedstock Production

Biomass Analytics
Genomics

Proteotoxicity from Aberrant Ribosome
Biogenesis Compromises Cell Fitness

Theme: Conversion

Proteomics
RNA Sequencing

RefSoil Database

Theme: Sustainability

Genomics

Miscanthus x giganteus Yield in a REpeated
PLAnting Year (REPLAY) Experiment across
Three Sites in Iowa, USA

Theme: Sustainability

Biomass Analytics
Field Data

pH Selectively Regulates Citric Acid and
Lipid Production in Yarrowia lipolytica W29
During Nitrogen-Limited Growth on Glucose

Theme: Conversion

RNA Sequencing
Transcriptomics

Peak Annotation and Verification Engine
for Untargeted LC-MS Metabolomics

Theme: Conversion

Metabolomics
Software

CropWatR

Theme: Sustainability

Economics
Modeling

A Designed Heme-[4Fe-4S] Metalloenzyme
Catalyzes Sulfite Reduction Like the Native
Enzyme

Theme: Conversion

Catalysis

Rapid Screening of Lanthipeptide Analogs
via In-Colony Removal of Leader Peptides
in Escherichia coli

Theme: Conversion

Genome Engineering
Genomics

Cooperative Asymmetric Reactions Combining
Photocatalysis and Enzymatic Catalysis

Theme: Conversion

Catalysis