Soil Bacterial Microbial Community Associated with Miscanthus giganteus Sequencing Data

CABBI Theme: Sustainability

Keyword: Genomics

Citation

Ma, L., Rocha, F.I., Lee, J., Choi, J., Tejera, M., Sooksa-Nguan T., Boersma, N.N., VanLoocke, A., Heaton, E., Howe, A. Jan. 17, 2020. “Soil Bacterial Microbial Community Associated with Miscanthus giganteus.” NCBI. https://www.ncbi.nlm.nih.gov/bioproject/PRJNA601860/.

While relative abundance of shared taxa remained similar across all stand years (A), unique taxa represented a greater proportion of the microbial community at the youngest stand age than at older stand ages (B).

Overview

This project aims to study the effects of planting year of Miscanthus and nitrogen fertilization rates on associated bacterial microbial community.

Additional Data

Accompanying data and code for analysis

Related Publications

Ma, L., Rocha, F.I., Lee, J., Choi, J., Tejera, M., Sooksa-Nguan T., Boersma, N.N., VanLoocke, A., Heaton, E., Howe, A. Nov. 9, 2020. “The Impact of Stand Age and Fertilization on the Soil Microbiome of Miscanthus x giganteus.” Phytobiomes Journal. DOI: 10.1094/PBIOMES-01-20-0014-FI.

Yang, J., Lee, J., Choi, J., Ma, L., Heaton, E., Howe, A. Feb. 16, 2022. “Response of Total (DNA) and Metabolically Active (RNA) Microbial Communities in Miscanthus x giganteus Cultivated Soil to Different Nitrogen Fertilization Rates.” Microbiology Spectrum. DOI:10.1128/spectrum.02116-21.