JGI Genome Portal

CABBI Themes: Conversion, Feedstock Production, Sustainability

Keywords: Genome, Sequence Data, Transcriptome

Web-Tool Link

JGI Genome Portal

Overview

CABBI has worked with the DOE’s Joint Genome Institute to produce sequence data from all three CABBI themes. Genomic data can be searched through JGI’s Genome Portal. Datasets include: genome sequencing of CABBI yeasts; microbial metatranscriptome sequencing; and genome sequencing of CABBI crops.

Subset of Datasets Included

Near-Complete Genome Sequence of Zygosaccharomyces Rouxii NRRL Y-64007, a Yeast Capable of Growing on Lignocellulosic Hydrolysates

Sorghum bicolor Genetic Variants Gene Expression Profiling

Miscanthus sinensis GBS Population 1

Comparison of Nitrogen-Associated Microbial Communities in Response to Stand Age and Fertilization